Transcriptome data for three tissues (root, inflorescence and leaf) of six species of Linospadix and one species of Laccospadix

This dataset contains RNA-seq of root, leaf and inflorescence tissue of multiple individuals and 6 species of Linospadix and one species of Laccospadix collected from Lord Howe Island, Australia.

The work was carried out by Imperial College London, and was funded by the NERC grant NE/M015742/1.

This data is NERC-funded but not held by the EIDC.

This data is archived in NCBI Genbank at https://www.ncbi.nlm.nih.gov/nuccore with accession numbers SRX5562387-SRX5562441 (inclusive)

Identification info

Metadata Language: English (en)

Character set: utf8

Dataset Reference Date (): 2020-11-02

Dataset Reference Date (): 2020-02-06

Identifier: https://catalogue.ceh.ac.uk/id/6697dd1d-85f4-4222-b862-a10a16208703

Imperial College London - Professor Vincent Savolainen

Imperial College London - Savolainen, V.

NCBI (SRA)

Environmental Information Data Centre

GEMET - INSPIRE themes, version 1.0 ()

Environmental Monitoring Facilities

Keywords

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Topic category

Biota

Begin date: 2015-09-01

End date: 2018-05-31

Distribution Information

Data format

FASTA DNA sequences ()

Resource Locator: Accession details for NCBI (SRA)
Data held at NCBI (SRA) with study numbers SRX5562387-SRX5562441 (inclusive)

Resource Locator: Accession details for NCBI (SRA)
Data held at NCBI (SRA) with study numbers SRX5562387-SRX5562441 (inclusive)

Quality Scope: dataset

Other: dataset

Report

Dataset Reference Date (): 2010-12-08

Statement: Wild sample of root, leaf and inflorescence tissue of multiple individuals and 6 species of Linospadix and one species of Laccospadix were sequenced using Illumina HiSeq4000 for RNA-seq/ The library prep carried out according to Beijing Genomics Institute standard protocols

Metadata

File identifier: 6697dd1d-85f4-4222-b862-a10a16208703 XML

Metadata Language: English (en)

Character set: ISO/IEC 8859-1 (also known as Latin 1)

Resource type: dataset

Hierarchy level name: dataset

Metadata Date: 2022-05-04T15:39:34

Metadata standard name: UK GEMINI

Metadata standard version: 2.3

Environmental Information Data Centre

Lancaster Environment Centre, Library Avenue, Bailrigg , Lancaster , LA1 4AP , UK

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