Management data and antibiotic resistant E. coli detection in pre-weaned calves on 51 dairy farms, South West England, 2017-2018

This dataset consists of faecally-contaminated samples taken from the environment around pre-weaned calves on 51 farms in South-West England during 2017/2018 and is a subset of a larger dataset investigating antibiotic resistance in E. coli across 53 farms. The samples were analysed for presence of E. coli resistant to amoxicillin, streptomycin, cephalexin, tetracycline and/or ciprofloxacin. Management factors deemed related to pre-weaned calves are included, including antibiotic usage data at farm level. Full details about this dataset can be found at https://doi.org/10.5285/808b2b62-14db-4483-b0e6-5f533c007eec

Identification info

Metadata Language: English (en)

Character set: utf8

Dataset Reference Date (): 2021-09-16

Identifier: https://catalogue.ceh.ac.uk/id/808b2b62-14db-4483-b0e6-5f533c007eec

Identifier: doi: / 10.5285/808b2b62-14db-4483-b0e6-5f533c007eec

Other citation details: Reyher, K., Avison, M., Schubert, H., Cogan, T., Gould, V.C. (2021). Management data and antibiotic resistant E. coli detection in pre-weaned calves on 51 dairy farms, South West England, 2017-2018. NERC EDS Environmental Information Data Centre 10.5285/808b2b62-14db-4483-b0e6-5f533c007eec

University of Bristol - Reyher, K.

University of Bristol - Avison, M.

University of Bristol - Schubert, H.

University of Bristol - Cogan, T.

University of Bristol - Gould, V.C.

NERC EDS Environmental Information Data Centre

University of Bristol - Gould, V. C.

University of Bristol

GEMET - INSPIRE themes, version 1.0 ()

Agricultural and Aquaculture Facilities

Keywords

Environmental risk
South West England
Cattle
Antimicrobial resistance

Limitations on Public Access: otherRestrictions

Other constraints: no limitations

Use constraints: otherRestrictions

Other constraints: This resource is available under the terms of the Open Government Licence

Use constraints: otherRestrictions

Other constraints: If you reuse this data, you should cite: Reyher, K., Avison, M., Schubert, H., Cogan, T., Gould, V.C. (2021). Management data and antibiotic resistant E. coli detection in pre-weaned calves on 51 dairy farms, South West England, 2017-2018. NERC EDS Environmental Information Data Centre https://doi.org/10.5285/808b2b62-14db-4483-b0e6-5f533c007eec

Spatial representation type: textTable

Topic category

Farming

Begin date: 2017-01-01

End date: 2018-12-31

Code: GB place names

Distribution Information

Data format

Comma-separated values (CSV) ()

Resource Locator: Download the data
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Resource Locator: Supporting information
Supporting information available to assist in re-use of this dataset

Resource Locator: Download the data
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Resource Locator: Supporting information
Supporting information available to assist in re-use of this dataset

Quality Scope: dataset

Other: dataset

Report

Dataset Reference Date (): 2010-12-08

Statement: This dataset is a subset of the "Farm management and longitudinal data on antibiotic use and antibiotic resistant E. coli for 53 dairy farms, South West England, 2017-2019" dataset (https://catalogue.ceh.ac.uk/documents/c9bc537a-d1c5-43a0-b146-42c25d4e8160) and comprises of 1. Records of samples taken from 51 farms including date, type, eartag numbers of animals in the immediate environment, and descriptive location of sample. 2. Results of microbiological analyses of the samples to identify E. coli resistant to amoxicillin, cephalexin, tetracycline, ciprofloxacin and/or streptomycin. 3. For samples where E. coli resistant to cephalexin were detected, results of laboratory testing for resistance mechanism. 3. For samples where E. coli resistant to cephalexin was detected, results of laboratory testing for resistance mechanism. 4. Questionnaires administered to farmers between Jan 2017 and Jan 2019. These collected demographic and farm management data at the start and end of the data collection periods for each farm, as well as questionnaires around choices of antibiotic administered during the data collection period at the convenience of the participants. 5. Prescription medication records acquired from veterinary practices and farm records. All calculations and data entry were checked for errors before data was accepted.

Metadata

File identifier: 808b2b62-14db-4483-b0e6-5f533c007eec XML

Metadata Language: English (en)

Character set: ISO/IEC 8859-1 (also known as Latin 1)

Resource type: dataset

Hierarchy level name: dataset

Metadata Date: 2022-05-18T12:21:40

Metadata standard name: UK GEMINI

Metadata standard version: 2.3

Environmental Information Data Centre

Lancaster Environment Centre, Library Avenue, Bailrigg , Lancaster , LA1 4AP , UK

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