Phenology
Type of resources
Topics
Keywords
Contact for the resource
Provided by
Years
Formats
Representation types
Update frequencies
Resolution
-
This dataset includes the dates and/or duration of all the environmental and phenological events that could be derived from a series of photographs taken by a fixed-point repeat camera system at the UK Environmental Change Network (ECN) site in the Cairngorms National Park, Scotland. The data covers the timing of permanent winter snow fall and subsequent spring melt on northern and eastern facing hill slopes between 2002 and 2019, as well as invertebrate (spittlebug spittlemass) and plant (heather flowering, scots pine leaf flushing) phenological events between 2010 and 2019. Three photographs were taken on a daily basis to maximise the chances of cloud free images, with the clearest image used for analysis. Event detection was generally achieved using manual assessment, but heather flowering showed a high degree of subjectivity, and so an automated pixel colour counting method was used to determine the peak flowering season. This work was supported by the Natural Environment Research Council award number NE/R016429/1 as part of the UK-SCAPE programme delivering National Capability. Full details about this dataset can be found at https://doi.org/10.5285/8e30cead-700c-425c-841f-74c70659666a
-
[THIS DATASET HAS BEEN WITHDRAWN]. The leaf phenology product presented here shows the amplitude of annual cycles observed in MODIS (Moderate Resolution Imaging Spectroradiometer) normalized difference vegetation index (NDVI) and enhanced vegetation index (EVI) 16-day time-series of 2000 to 2013 for Meso- and South America. The values given represent a conservative measure of the amplitude after the annual cycle was identified and tested for significance by means of the Fourier Transform. The amplitude was derived for four sets of vegtation indices (VI) time-series based on the MODIS VI products (500m MOD13A1; 1000m MOD13A2). The amplitude value can be interpreted as the degree in which the life cycles of individual leaves of plants observed within a pixel are synchronised. In other words, given the local variation in environment and climate and the diversity of species leaf life cycle strategies, an image pixel will represent vegetation communities behaving between two extremes: * well synchronized, where the leaf bud burst and senescence of the individual plants within the pixel occurs near simultaneously, yielding a high amplitude value. Often this matches with an area of low species diversity (e.g. arable land) or with areas where the growth of all plants is controlled by the same driver (e.g. precipitation). * poorly synchronized, where the leaf bud burst and senescence of individual plants within a pixel occurs at different times of the year, yielding a low amplitude value. Often this matches with an area of high species diversity and/or where several drivers could be controlling growth. Full details about this dataset can be found at https://doi.org/10.5285/36795e9d-2380-465c-947b-3c9ae26f92d0
-
This dataset describes environmental conditions at 135 Saiga antelope calving sites (from a total of 214) in Kazakhstan where the predictor variables required for the modelling were available at sufficient resolution. Data collected included climatic variables associated with haemorrhagic septicaemia in the literature, including humidity, temperature and precipitation. Indicators of vegetation biomass, phenology and length of the winter preceding calving were represented using the Normalised Difference Vegetation Index (NDVI), snow depth and snow presence data. Saiga antelope are susceptible to mass mortality events (MME), the most severe of which are caused by haemorrhagic septicaemia following infection by the bacteria Pasteurella multocida. These die-off events tend to occur in May during calving, when saigas gather in dense aggregations. As the bacteria is a commensal organism, which may live harmlessly in the respiratory tract of the saiga, it is believed that an environmental trigger is involved in a shift to virulence in the pathogen or reduction in immune-competence in the host. The attached data show environmental conditions at a set of calving sites of the Betpak-dala population of saigas. This population, one of three in Kazakhstan, is located in the central provinces of the country and is the only one in which massive haemorrhagic septicaemia outbreaks have been recorded. At most of the recorded sites, calving progressed normally, whilst at others mass mortality events occurred during calving or just afterwards, namely in 1981, 1988 and 2015. A set of environmental predictor variables was used to model the probability of an MME at calving aggregations. The dataset, modelling process and results are described in Kock et al. (2018): http://advances.sciencemag.org/content/4/1/eaao2314 A related shapefile of the full set of 214 sites, and metadata concerning site characteristics and the provenance of the location data is available at: https://catalogue.ceh.ac.uk/id/8ad12782-e939-4834-830a-c89e503a298b The attached dataset and site metadata in the above-mentioned Shapefile attribute table can be combined using the variable ID in order to merge the environmental data with information on the calving and MME sites. Full details about this dataset can be found at https://doi.org/10.5285/912ea336-ac90-418f-be6a-7ae226e167e9
-
This dataset contains data on temperature and tritrophic phenology collected across 44 sites in Scotland for the period 2014 – 2021. Each site was visited every two days through the spring. The phenology of first budburst and leaf out of approx. 700 marked trees was recorded. Every four days marked branches were beaten and data was collected on the number of caterpillars (and spiders and beetles). Data on the breeding phenology (first egg date, hatch date) and breeding success of blue tits was recorded at 4-8 nestboxes per site. This work was supported by Natural Environment Research Council grant NE/P011802/1. Full details about this dataset can be found at https://doi.org/10.5285/b63d53ae-2fe7-4ce9-82a2-2325098489e3
-
The leaf phenology product presented here shows the amplitude of annual cycles observed in MODIS (Moderate Resolution Imaging Spectroradiometer) normalized difference vegetation index (NDVI) and enhanced vegetation index (EVI) 16-day time-series of 2000 to 2013 for Meso- and South America. The values given represent a conservative measure of the amplitude after the annual cycle was identified and tested for significance by means of the Lomb-Scargle Transform. The amplitude was derived for four sets of vegtation indices (VI) time-series based on the MODIS VI products (500m MOD13A1; 1000m MOD13A2). The amplitude value can be interpreted as the degree in which the life cycles of individual leaves of plants observed within a pixel are synchronised. In other words, given the local variation in environment and climate and the diversity of species leaf life cycle strategies, an image pixel will represent vegetation communities behaving between two extremes: * well synchronized, where the leaf bud burst and senescence of the individual plants within the pixel occurs near simultaneously, yielding a high amplitude value. Often this matches with an area of low species diversity (e.g. arable land) or with areas where the growth of all plants is controlled by the same driver (e.g. precipitation). * poorly synchronized, where the leaf bud burst and senescence of individual plants within a pixel occurs at different times of the year, yielding a low amplitude value. Often this matches with an area of high species diversity and/or where several drivers could be controlling growth. Full details about this dataset can be found at https://doi.org/10.5285/dae416b4-3762-45bd-ae14-c554883d482c
-
Data on timing of breeding, breeding success and diet of the European shag, sampled from the Isle of May population. The data were collected between 1985 and 2015 by visually checking nests and collecting regurgitated diet samples. These data are part of the Isle of May long-term study to assess population trends of seabirds under environmental change (IMLOTS https://www.ceh.ac.uk/our-science/projects/isle-may-long-term-study). Full details about this dataset can be found at https://doi.org/10.5285/6231bd5b-ee2d-4cca-a9ef-88006ffa4976
-
[THIS DATASET HAS BEEN WITHDRAWN]. This dataset comprises information of location and cytotype of over 1300 samples of Campanula rotundifolia L. from the northern hemisphere (mostly from Britain and Ireland) and data from a common garden study in which British and Irish cytotypes were grown together and their flowering phenology and growth were assessed. Campanula rotundifolia L. is a widespread polyploid perennial herbaceous plant, with diploid, tetraploid, pentaploid and hexaploid cytotypes. Full details about this dataset can be found at https://doi.org/10.5285/f27cf73b-65f0-4838-b6ad-efe865a4188c
-
Data collected from an experimental inoculation study of house finches with isolates of the bacterial pathogen, Mycoplasma gallisepticum, conducted at Arizona State University, USA in 2015. Data include multiple measurements of disease progression obtained as measures of body mass, symptoms severity scores and infection status. The birds were caught from wild-populations and brought back into the laboratory in July 2015 to allow them to acclimate to laboratory conditions before study onset in October 2015. The experiment was then run for 34-days. Full details about this dataset can be found at https://doi.org/10.5285/ef96a901-a728-493d-8648-641e450d555d
-
Data were collected to determine the geographic distribution of different cytotypes of Campanula rotundifolia L. Most sampling concentrated on Britain and Ireland, but samples from mainland Europe, the Russian Federation and North America were also analysed. Following these observations, a common garden study of tetraploid, pentaploid and hexaploid cytotypes representative of Britain and Ireland was set up at a CEH Edinburgh (where the local cytotype is tetraploid), to determine whether climatic factors were limiting the distribution of the hexaploid cytotype through effects on growth, survival or flowering phenology. The geographic distribution study ran from 2006-2019. The common garden study ran from 2008-2010. Full details about this dataset can be found at https://doi.org/10.5285/673b2b31-562c-4604-8776-4a92988867b8
-
This dataset contains details of the phenotypes (height, bud set and budburst) and genotypes (via SNP array) of trees from a common garden multi-species pine (Pinus sylvestris, Pinus mugo and Pinus uncinata) glasshouse trial between 2010 and 2013. Full details about this dataset can be found at https://doi.org/10.5285/55118e26-cf5c-41d6-9157-738fce6bdddf