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  • This dataset contains over 4000 faecally-contaminated environmental samples collected over 2 years across 53 dairy farms in England. The samples were analysed for E. coli resistance to amoxicillin, streptomycin, cefalexin, tetracycline and ciprofloxacin and detection of resistant strains is presented in the dataset as a binary result, along with mechanisms of resistance to third generation cephalosporins where relevant. In addition there is comprehensive farm management data including antibiotic usage data. Full details about this dataset can be found at https://doi.org/10.5285/c9bc537a-d1c5-43a0-b146-42c25d4e8160

  • This dataset consists of faecally-contaminated samples taken from the environment around pre-weaned calves on 51 farms in South-West England during 2017/2018 and is a subset of a larger dataset investigating antibiotic resistance in E. coli across 53 farms. The samples were analysed for presence of E. coli resistant to amoxicillin, streptomycin, cephalexin, tetracycline and/or ciprofloxacin. Management factors deemed related to pre-weaned calves are included, including antibiotic usage data at farm level. Full details about this dataset can be found at https://doi.org/10.5285/808b2b62-14db-4483-b0e6-5f533c007eec

  • This dataset represents a cohort of heifers followed from birth to 18 months or first pregnancy on 37 farms in the South West of England. Faecally-contaminated environmental samples were collected over 2 years and the samples analysed for E. coli resistance to amoxicillin, cefalexin and tetracycline with detection of resistant strains presented in the dataset as a binary result. Farm-level antibiotic usage data is also given. Full details about this dataset can be found at https://doi.org/10.5285/7c3ad803-fbd4-45c3-826b-fa04c902ded8

  • This is a web map service (WMS) of Digital Terrain Model (DTM) data in South West England at a 1m resolution. The DTM covers an area of 9424 km2 that includes all the land west of Exmouth (i.e. west of circa 3 degrees 21 minutes West). The DTM represents the topographic model (height) of the bare earth. The dataset is a part of outcomes from the Centre for Ecology & Hydrology South West (SW) Project.

  • This is a web map service (WMS) of Digital Surface Model (DSM) data in South West England at a 1m resolution. The DSM covers an area of 9424 km2 that includes all the land west of Exmouth (i.e. west of circa 3 degrees 21 minutes West). The DSM includes the height of features on the bare earth such as buildings or vegetation (if present). The dataset is a part of outcomes from the Centre for Ecology & Hydrology South West (SW) Project.

  • This is a high resolution spatial dataset of Digital Terrain Model (DTM) data in South West England. The DTM along with a Digital Surface Model (DSM) cover an area of 9424 km2 that includes all the land west of Exmouth (i.e. west of circa 3 degrees 21 minutes West). The DTM represents the topographic model (height) of the bare earth. The dataset is a part of outcomes from the Centre for Ecology & Hydrology South West (SW) Project. There is also a Digital Surface Model (DSM) dataset covering the same areas available from the SW project. Full details about this dataset can be found at https://doi.org/10.5285/e2a742df-3772-481a-97d6-0de5133f4812

  • Third-generation cephalosporin resistance (3GC-R) in Escherichia coli is a rising problem in human and farmed-animal populations. We conducted whole-genome sequencing analysis of representative 3GC-R isolates previously collected from dairy farms in southwest England, and human urinary isolates collected from the same geographical area and time-period, and confirmed by PCR to carry acquired 3GC-R genes. This analysis identified blaCTX-M (131 isolates encoding CTX-M-1, -14, -15, -and 32 and the novel variant CTX-M-214), blaCMY-2 (6 isolates), and blaDHA-1 (1 isolate). A highly conserved plasmid was identified in 73 isolates, representing 27 E. coli sequence types. This novel ∼220-kb IncHI2 plasmid carrying blaCTX-M-32 was sequenced to closure and designated pMOO-32. 'This data is NERC-funded but not held by the EIDC. This data is archived in the European Nucleotide Archive'.