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James Hutton Institute

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From 1 - 10 / 10
  • This record contains time series observations of land surface-atmosphere exchanges of net ecosystem carbon dioxide exchange (NEE), sensible heat (H) and latent heat (LE), and meteorological observations measured at an eroded upland blanket bog peatland (UK-BAL) in the Eastern Cairngorms in Scotland, UK (56.93° N, -3.16° E, 642 m asl). The dataset comprises eddy covariance CO2, water and energy fluxes, originally collected at 20Hz and processed to 30-minute data, as well as accompanying meteorological observations, originally collected at 15 min and processed to 30-minute data. Time period covered in this dataset is 04/07/2018 until 04/11/2020. Full details about this dataset can be found at https://doi.org/10.5285/a65f6241-bfc3-430a-ae93-ccb7c63c1a53

  • This dataset contains a list of all known birds, bryophytes, fungi, invertebrates, lichens and mammals that use oak (Quercus petraea and Quercus robur) in the UK. In total 2300 species are listed in the dataset. For each species we provide a level of association with oak, ranging from obligate (only found on oak) to cosmopolitan (found on a wide range of other tree species). Data on the ecology of each oak associated species is provided: part of tree used, use made of tree (feeding, roosting, breeding), age of tree, woodland type, tree form (coppice, pollarded, or natural growth form) and season when the tree was used. Data on use or otherwise by each of the 2300 species of 30 other alternative tree species (Acer campestre, Acer pseudoplatanus, Alnus glutinosa, Betula pendula, Betula pubescens, Carpinus betulus, Castanea sativa, Fagus sylvatica, Fraxinus excelsior, Ilex aquifolium, Larix spp, Malus sylvestris, Picea abies, Pinus nigra ssp. laricio, Pinus sylvestris, Populus tremula, Prunus avium, Pseudotsuga menziesii, Quercus cerris, Quercus rubra, Sorbus aria, Sorbus aucuparia, Sorbus torminalis, Taxus baccata, Thuja plicata, Tilia cordata, Tilia platyphyllos, Tilia vulgaris, Tsuga heterophylla, Ulmus glabra) was also collated. A complete list of data sources is provided. Full details about this dataset can be found at https://doi.org/10.5285/22b3d41e-7c35-4c51-9e55-0f47bb845202

  • [This dataset is embargoed until March 22, 2023]. This dataset contains time series observations of land surface-atmosphere exchanges of net ecosystem carbon dioxide exchange (NEE), sensible heat (H) and latent heat (LE), methane (CH4) and meteorological observations measured at two locations in the Flow Country blanket bog complex, Caithness and Sutherland, UK. The tower over the area affected by wildfire after initial felling (UK-DKF) is located at 58.431, -3.96 and monitors across a footprint affected by a wildfire in early May 2019. The tower over the area felled for restoration after previous afforestation (UK-DKE-RESTORED, which was not affected by the wildfire) is located at 58.428, -3.967 and measures fluxes from a footprint identical in ground flora, topography, soil type and previous management to that of the FIRE tower, with the only exception that the fire did not reach as far as the footprint monitored. The dataset comprises eddy covariance CO2, water and energy fluxes, originally collected at 20Hz and processed to 30-minute data, as well as accompanying meteorological observations, originally collected at 15 min and processed to 30-minute data. The time period covered in this dataset is 25/09/2019 – 20/05/2021. Full details about this dataset can be found at https://doi.org/10.5285/d4a7ca90-0c62-4a31-986e-f433e1644bf3

  • The dataset collates the relative concentration of nearly 300 antimicrobial resistance (AMR) genes found in soil locations across Scotland. Soils were obtained from the National Soils Inventory of Scotland (NSIS2), from which the total community DNA were extracted and provided to assess AMR gene content. Sampling of the NSIS2 was conducted between 2007-2010 at 183 soil locations representing intersections of a 20km grid across all of Scotland. For each sample, nearly 300 AMR genes were assessed representing major antibiotic classes, and included many resistance traits: aminoglycosides, beta-lactams, FCA (fluoroquinolone, quinolone, chloramphenicol, florfenicol and amphenicol resistance genes), MLSB (macrolide, lincosamide, streptogramin B), tetracycline, vancomycin, sulphonamide, efflux pumps and integron genes. The data represent relative gene abundance, i.e., the amount of genes per “total bacteria.” Full details about this dataset can be found at https://doi.org/10.5285/d3498e93-4ac5-4eab-bc1a-eb2328771d24

  • This dataset contains data pertaining to the phenotypes (height and budburst) and genotypes (via SNP array) for a subset of trees from a long term multi-site Scots pine experimental trial. Full details about this dataset can be found at https://doi.org/10.5285/52248442-a50f-4fc0-a73e-31c61cd27df9

  • Phenotypes (growth, phenology and form) for Scots pine trees in a long-term common garden trial grown in three nurseries in Scotland and surveyed from 2007 to 2011. Full details about this dataset can be found at https://doi.org/10.5285/29ced467-8e03-4132-83b9-dc2aa50537cd

  • Phenotypes for Scots pine mother trees and their cones/seed from 21 populations across Scotland in 2007. The seed was used to establish a long-term multisite common garden trial at three nurseries/field sites. Full details about this dataset can be found at https://doi.org/10.5285/ac687a66-135e-4c65-8bf6-c5a3be9fd9aa

  • Phenotypes (growth and phenology) for Scots pine trees in a long-term common garden trial planted in three sites in Scotland, surveyed annually from 2013 to 2020. Full details about this dataset can be found at https://doi.org/10.5285/f463bc5c-bb79-4967-a8dc-f662f57f7020

  • Data was collected in an in-person household survey in Can Tho, Vietnam. Respondents were interviewed in central locations in randomly selected wards and subwards across the centre of the city. The survey covered the perception and use of green and blue spaces in the city. At its core it contains a discrete choice experiment to value a set of ecosystem services and disservices of urban parks: flood management, recreational facilities and (desirable and undesirable) biodiversity. 'This data is NERC-funded (NE/S002871/2) but not held by the EIDC. This data is archived in the UKDataService

  • This dataset reports results on seedling growth and survival for two hyphal exclusion experiments in a subtropical forest. The data include survival status, height, total biomass and the biomass of component plant parts, percentage root colonisation by mycorrhizas, for tree seedlings of ten common species including five ectomycorrhizal (ECM) and five arbuscular mycorrhizal (AM) species, which were transplanted in the in-growth cores with windows covering different sizes of nylon meshes (35 vs. 0.5 µm). The dataset provides raw data on growth and survival metrics for each seedling, plus identifying codes for the dominant sites where the experiments were conducted, as well as experimental block, mesh treatment, botanical names for the tree species, and mycorrhizal type. The data were entered into Excel spreadsheets and exported as comma separated value files (csv). Study area - the Heishiding Nature Reserve (111°53’E, 23°27’N, 150-927 m a.s.l.) in Guangdong Province of south China. Full details about this dataset can be found at https://doi.org/10.5285/f1d17e61-bb6c-47a9-a648-062c63ea7f16