University of Birmingham
Type of resources
Contact for the resource
This dataset contains fitness-linked life history traits, environmental data, and protein and gene expression data for Daphnia magna. Life history data were measured in common garden experiments. For each clone of the same genotype across all experiments, size at maturity (distance between the head and the base of the tail spine), age at maturity (first time eggs were observed in the brood chamber), fecundity (total number of offspring released summing first and second brood), and mortality were measured. Critical thermal maximum (CTmax) was measured on the experimental animals. Environmental data consisted of Secchi disk depth (water transparency) ; total phosphorous; and total nitrogen for the years 1971–1999; a record of pesticides 1955–2010; temperature records over the past century 80 km from Lake Ring. Organic and carbonate contents of the sediment was estimated using the loss on ignition (LOI) method. Hb protein data consisted of constitutive Hb protein crude content animals reared in normoxic (saturated oxygen level) conditions at two experimental temperatures, 20 and 30°C. Heat shock protein expression was measured in four heat shock proteins (HSP20, HSP60, HSP70 and HSP90). Total RNA, qPCR, mean CT (cycle threshold) value per sample and per protein were collected. Full details about this dataset can be found at https://doi.org/10.5285/13f878dc-ef87-45d5-be8c-5733c88c30e9
Continental extension leading to breakup: determining the 3D structure of the west Galicia rifted margin (NERC Grant NE/E015883/1)
The data result from a cooperative project between the U.K., U.S., Germany, Spain, and Portugal. This 2013 seismic experiment surveyed the Galicia Bank region off Iberia with the RV Marcus Langseth. The goal was to collect 3D seismic reflection data specifically designed to reveal the 3D structures generated during the rifting of the Galicia margin and to study the rifted continental to oceanic crust transition in the Deep Galicia Margin west of Spain. The data correspond to a 68.5km x 20 km volume down to 14s TWT with a nominal inline spacing of 6.25 m and a cross-line spacing of 50m, including 800 inlines and 5500 cross-lines. References Bayrakci, G., Minshull, T.A., Sawyer, D.S., Reston, T.J., Klaeschen, D., Papenberg, C., Ranero, C., Bull, J.M., Davy, R.G., Shillington, D.J., Perez-Gussinye, M., and Morgan, J.K., 2016, Fault-controlled hydration of the upper mantle during continental rifting, Nature Geoscience, vol. 9, p. 3840388, DOI: 10.1038/ngeo2671. URL: http://www.nature.com/ngeo/journal/v9/n5/full/ngeo2671.html R. G. Davy, J. V. Morgan, T. A. Minshull, G. Bayrakci, J. M. Bull, D. Klaeschen, T. J. Reston, D. S. Sawyer, G. Lymer, D. Cresswell, 2017. Resolving the fine-scale velocity structure of continental hyperextension at the Deep Galicia Margin using full-waveform inversion. Geophysical Journal International, Volume 212, Issue 1, 1 January 2018, Pages 244–263, https://doi.org/10.1093/gji/ggx415 C.Nur Schuba, Gary G.Gray, Julia K.Morgan, Dale S.Sawyer, Donna J. Shillington, Tim J.Reston, Jonathan M.Bull, Brian E.Jordan, 2018. A low-angle detachment fault revealed: Three-dimensional images of the S-reflector fault zone along the Galicia passive margin. Earth and Planetary Science Letters, 492, (2018), 232–238, https://doi.org/10.1016/j.epsl.2018.04.012
This dataset contains data from a river multibeam and seismic survey which took place in 2013 and 2014 at scour sites within the Brahmaputra river basin in Bangladesh. The survey was carried out as part of a joint project between the Universities of Birmingham, Southampton and Exeter. "The sedimentology of fluvial megascours" was a scientific research project funded by NERC. The purpose was to collect the data necessary to validate the first generic numerical model of scour zone stratigraphy that will be widely applicable to a broad range of large rivers. River bed bathymetry data were collected using a multibeam echosounder. Sub bottom seismic profiling data were collected using a surface tow boomer and chirp system. Technical details of the survey are contained in the cruise report of the survey which comprises part of the metadata. Some of the data has been accepted for a publication in the journal 'Sedimentology' which will be published in 2018 with the title 'The Sedimentology of channel confluences'.
speleothem data - ICP-AES (Inductively coupled plasma atomic emission spectroscopy) , incomplete soil acidity experiments - soil water chemistry after acidification - incomplete
This dataset contains numerical model output of a morphodynamic and sedimentological simulation of a large river confluence based loosely on the Jamuna-Ganges junction in Bangladesh. The work was carried out as part of a joint project between the Universities of Birmingham, Southampton and Exeter. "The sedimentology of fluvial megascours" was a scientific research project funded by NERC. One aspect of the project was to undertake numerical simulations (the data described here) with which to compare with river bed bathymetry data (collected using a multibeam echosounder) and sub bottom seismic profiling data (collected using a surface tow boomer and chirp system). The data has been accepted for a publication in the journal 'Sedimentology' which will be published in 2018 with the title 'The Sedimentology of channel confluences'.
Seasonal breakthrough curves of conservative (fluorescein) and reactive (resazurin and resorufin) tracers at an agriculturally-impacted stream at Wood Brook, UK, 2016-2017
This dataset contains breakthrough curves of conservative (fluorescein) and reactive (resazurin and resorufin) tracers resulting from instantaneous tracer experiments in a lowland agricultural stream. Breakthrough curves were measured seasonally at four locations within the stream, creating three experimental reaches, in the Wood Brook, Staffordshire from July 2016 to March 2017. Breakthrough curves were measured in-situ using on-line fluorometers configured to measure the excitation of fluorescein, resazurin and resorufin every 10 seconds. The breakthrough curves were measured to determine hydrological metrics of advective transport, transient storage and aerobic respiration. The work was funded by the Natural Environment Research Council, UK through a through a Central England NERC Training Alliance Studentship and grant NE/ L004437/1, with additional funding provided by the European Union through the H2020-MSCA-RISE-2016 project 734317. Full details about this dataset can be found at https://doi.org/10.5285/5b34d963-d0f0-465e-b395-e955b89e1cd7
Carbon dioxide and methane emissions from incubated streambed sediments from the rivers Tern and Lambourn, England (2015)
The dataset contains carbon dioxide and methane emissions, as well as resorufin production (as a proxy for microbial metabolic activity) and dissolved oxygen concentrations, resulting from laboratory incubation experiments of streambed sediments. The sediments were collected from the upper 10 centimetres of the streambed in the River Tern and the River Lambourn in September 2015, with three samples collected from each river. These samples were collected from three areas: silt-dominated sediment underneath vegetation (fine), sand-dominated sediment from unvegetated zones (medium) and gravel-dominated sediment from unvegetated zones (coarse). The sediment was used in laboratory incubation experiments to determine the effect of temperature, organic matter content, substrate type and geological origin on streambed microbial metabolic activity, and carbon dioxide and methane production. The work was carried out as part of a Natural Environment Research Council (NERC) funded PhD (NERC award number 1602135). The work was also part funded through the Seventh Framework Programme (EU grant number 607150). Full details about this dataset can be found at https://doi.org/10.5285/3a0a5132-797c-4ed5-98b9-1c17eaa2f2b7
Seasonal streambed carbon and nitrogen cycling (including greenhouse gases) in an agriculturally-impacted stream. Measured at Wood Brook UK, 2016-2017
The dataset contains chemistry data from streambed porewater (10 and 20 cm) and surface water, as well as nitrogen chemistry data at 2.5 cm resolution within the upper 15 cm of the streambed. The dataset includes concentrations of dissolved organic carbon (DOC), carbon dioxide, methane, ammonium, nitrate, nitrite and nitrous oxide, and isotopic ratios of δ13CCO2, δ15NNO3+NO2 and δ18ONO3+NO2. Also included are measurements of dissolved oxygen and temperature. Samples were collected from three reaches within the stream, an upstream sandy reach, a mid-stream sandy reach and a downstream gravel reach. The work was carried out with Natural Environment Research Council (NERC) funding through a PhD (NERC award number 1602135), grant (NE/L004437/1) and Life Sciences Mass Spectrometry Facility grant (CEH_L102_05_2016). Full details about this dataset can be found at https://doi.org/10.5285/00601260-285e-4ffa-b381-340b51a7ec50
Major and trace element data for partial melts derived from high pressure-temperature experiments on a basaltic starting composition from the Ontong Java Oceanic Plateau.
Elemental and stable isotope data measured in Eocene foraminiferal calcite from Ocean Drilling Program Site 865 and Tanzanian Drilling Project Site 18 (NERC grants NE/H016457/1, NE/I005870/1, NE/I005595/1)
Elemental and stable isotope data measured in Eocene foraminiferal calcite from Ocean Drilling Program Site 865 and Tanzanian Drilling Project Site 18 published in Edgar et al. (2015) "Assessing the impact of diagenesis on δ11B, δ13C, δ18O, Sr/Ca and B/Ca values in fossil planktic foraminiferal calcite" in Geochimica et Cosmochimica Acta, v. 166, p. 189-209. Table 1. δ18O and δ13C values for glassy and frosty foraminifera from TDP Site 18 and ODP Site 865, respectively. Table 2. Sr/Ca and B/Ca values, and test weights for glassy and frosty foraminifera from TDP Site 18 and ODP Site 865, respectively. Table 3. δ11B values for glassy and frosty foraminifera from TDP Site 18 and ODP Site 865, respectively.