nonGeographicDataset
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Data comprise earthworm survival and weight change data after 28 days exposure to nanomaterials and reproduction data after 56 days exposure. Concentrations of zinc and silver in extracted soil pore water and ultra-filtered pore waters are reported as well as pH and dissolved organic carbon data. The body concentration of zinc, silver and titanium in three earthworms from each replicate after 28 days exposure are included. Data were generated from a laboratory exposure experiment of earthworms (Eisenia fetida) to soil amended with sewage sludge. The sewage sludges were from a wastewater treatment plant (WWTP) treated with nanomaterials (ENMs) or metal/ionic salts. Sewage sludges were generated with either no metal added to the WWTP influent (control), ionic ZnO, AgNO3 and bulk (micron sized) TiO2 added (ionic metal-treated) or ZnO, Ag and TiO2 ENMs added (ENM-treated). A sandy-loam soil was amended with the treated sewage sludge and aged in outdoor lysimeters for six months. Earthworms were exposed to the aged mixtures and a dilution of the mixtures (using control soil-sludge mix). Full details about this nonGeographicDataset can be found at https://doi.org/10.5285/cc4679fd-02c1-4dd1-8aca-201ca9caaf9a
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Data are of speed and accuracy of decision making in stickleback fish of different personalities. A laboratory population of three-spined sticklebacks (Gasterosteus aculeatus) were repeatedly tested in a T-maze. The work was carried out between March 2012 and February 2013 at The Structure and Motion Laboratory, Royal Veterinary College. The work was funded by a BBSRC studentship, NERC ( grant NE/H016600/2 Does diversity deliver? How variation in individual knowledge and behavioural traits impact on the performance of animal groups) and The Royal Society (RG 110401) All animal care and experimental procedures described here were approved as non-regulatory procedures by the Ethics and Welfare Committee of the Royal Veterinary College, London (URN 2011 1084). Full details about this nonGeographicDataset can be found at https://doi.org/10.5285/1ed2ab55-0688-4513-be9a-f9f0f21d2788
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This dataset was generated from a laboratory experiment investigating the toxicity of Zinc oxide nanoparticles and non-nanoparticles to the earthworm Eisenia andrei. The experiment followed the OECD protocol 222 OECD guideline for testing of chemicals Earthworm reproduction test (Eisenia fetida/andrei) 2004. Earthworms, Eisenia andrei, were exposed to Zinc oxide particles and nanoparticles, as well as an ionic reference, Zinc chloride, in soil for 28 days after which survival, reproduction and weight change were measured to assess the toxicity of the different zinc compounds. Full details about this nonGeographicDataset can be found at https://doi.org/10.5285/47644e3d-3abf-4fa2-9b82-991031f18b0b
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Terrestrial laser scanner (TLS) and CT scan data collected during flume experiments on a gravel bed. TLS data show the bed surface topography before and after waterworking of the bed. CT scan data show the 3D structure of sections of the river bed after waterworking. Some CT data has been processed to segment the images into the individual gravel grains, and for some of these data a database of grain properties is also available. Full details about this nonGeographicDataset can be found at https://doi.org/10.5285/6749d033-cdf4-479b-ba85-015c3dbb476a
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The data resource contains Drosophila simulans-sechellia backcross female mate choice (phenotype) aligned with whole-genome genotypes of 692 female backcross progeny. The data was generated in a laboratory at Stony Brook University New York and each test was conducted in 28.5 x 95mm plastic vials. Phenotype data was collected in 2015 and the final analysis was completed in 2021. Illumina libraries were sequenced at University of Oregon G3 Genomics Center, and the multiplexed shotgun genotyping (MSG) software was run at Janelia Research Campus Virginia. The experiments were conducted to align the genotype of females with behavioural phenotype, female preference. Three test females were allowed to choose from three males of either species. ‘Choice’ was determined by copulation, and the species of ‘chosen’ male was recorded before gDNA was extracted from the female. Standard molecular biology was used to generate Illumina libraries from individual backcross females for sequencing. Deniz Erezyilmaz was responsible for data collection and interpretation. Those genomes with ambiguous genotypes at more than 25% of markers due to sparse reads/coverage were eliminated from the analysis. The research was funded through NERC grant NE/S010351/1. Investigating the dual role of mate choice genes in behavioural isolation and hybridization. Full details about this nonGeographicDataset can be found at https://doi.org/10.5285/871c537d-2a84-432f-8597-7e895e0ffdcb
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The data resource contains Drosophila simulans backcross female mate choice (phenotype) aligned with whole-genome genotypes of 784 female backcross progeny. The data were generated in a laboratory at Stony Brook University, New York and each test was conducted in 28.5 x 95mm plastic vials. Phenotype data was collected in 2015 and the final analysis was completed in 2021. Illumina libraries were sequenced at University of Oregon G3 Genomics Center, and the multiplexed shotgun genotyping (MSG) software was run at Janelia Research Campus, Virginia. The experiments were conducted to align the genotype of females with behavioural phenotype, female preference. Three test females were allowed to choose from three males of either species. ‘Choice’ was determined by copulation, and the species of ‘chosen’ male was recorded before gDNA was extracted from the female. Standard molecular biology was used to generate Illumina libraries from individual backcross females for sequencing. Deniz Erezyilmaz was responsible for data collection and interpretation. Those genomes with incomplete or inconsistent genomes due to sparse reads/coverage were eliminated from the analysis. The research was funded through NERC grant NE/S010351/1. Investigating the dual role of mate choice genes in behavioural isolation and hybridization. Full details about this nonGeographicDataset can be found at https://doi.org/10.5285/8dde3529-1cf7-4b0f-907d-a1631f38afd7
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Dataset contains biomass and growth rates of ectomycorrhizal fungal species on different types of growth media in response to organic and inorganic nutrient additions. The fungi used were Laccaria bicolor (lb101B), Laccaria amethystina (la56), Paxillus involutus (Pi47), Piloderma byssinium (PbUP185), Suillus bovinus O96, Suillus viscidus (Sv171), and Suillus viscidus (SvAFST1). The diameter of fungal colonies was measured daily using a ruler over a 57 day period. Biomass was determined by removing the fungal mycelia, freeze-drying it and weighing on a microbalance. Full details about this nonGeographicDataset can be found at https://doi.org/10.5285/8eb1b693-8f56-4d97-b42d-f2c206dd33c0
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The data are derived from Alnus glutinosa plants grown in intact soil cores collected from beneath three co-occurring tree species. The data describe plant above and below ground biomass, coarse and fine root biomass, colonisation of roots by Frankia and ectomycorrhizal fungi, ecosystem carbon fluxes, capture of 13C from a pulse labelling process, 15N content of leaves, and soil nutrients. Full details about this nonGeographicDataset can be found at https://doi.org/10.5285/8816a55a-0e2e-4414-872f-3575170585dc
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These dataset files show the calibration of a sensor for mercury (II) ions using a Fluorimeter and either HgCl2 or HgNO3. A range of different sample conditions are tested, including sensor concentrations and relative proportions of water and a methanol co-solvent (required for solubility of the probe). Also tested was the ability of acid to affect the probes sensitivity to mercury as nitric acid is needed for the stability of HgNO3 as an analyte. File names listed show the concentration of sensor and the ratio of water to methanol tested. Inductively coupled plasma mass spectrometry (ICP-MS) data are also given these are used to validate the sensors calibration and also to monitor the levels of soluble mercury content of dental amalgam samples held at either (11⁰C or 37⁰C) in water and saliva. The supernatant of these suspensions is filtered and measured using ICP-MS to give the data as reported. Full details about this nonGeographicDataset can be found at https://doi.org/10.5285/bc82f15b-8db6-4398-bfec-655a1eecf2d7
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The raw data contain genotype information for offspring collected from controlled crosses of Teleopsis dalmanni. Parents were taken from laboratory stock populations. Offspring genotypes were assigned by sizing a microsatellite, which distinguishes sex-ratio distorting and nondistorting X chromosomes. Also included is information on offspring sex and food treatment. The processed data summarises genotype counts by collection date and cage id (date/food treatment/cage). Also included is a fitness calculation for each genotype in each cage. Full details about this nonGeographicDataset can be found at https://doi.org/10.5285/71529a64-6c1b-4c8f-ae3f-7c4870efd976